Congress Presentations

Re-live the Congress:
1) PDF copies of most presentations can be downloaded by clicking on the title links below.
2) Fora.tv streaming video is available by clicking on the ‘Watch Video’ links.
3) Video files can also be downloaded by clicking on the ‘Download’ link.  These (large!) files can be viewed in most web browsers or with free Flash Player software.
The full Commons Congress program is available on the Program page.

Keynote Speakers

Presentation
Stephen Friend,
Sage Bionetworks		 Purpose of Congress

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Jeff Hammerbacher,
Cloudera		 Moving from Narrative to Design with Open Source and Open Data

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John Wilbanks,
Creative Commons		 How to Build a Digital Commons
Anne Wojcicki,
23andMe		 Consumers, Genomes, & Research

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Special Guest Speaker

Presentation
Josh Sommer,
Chordoma Foundation		 Just cure my disease, please

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Project Group Reports

Presentation
A) End to end Pilot
A. Kasarskis, I. Kupershmidt		 Friday Summary Presentation
Saturday Synthesis Report		 Watch Video
B) Standards and Ontologies
Jesse Tannebaum		 Friday Summary Presentation
Saturday Synthesis Report

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C) Infrastructure Tools
C. Goble, T. Liefeld, A. Pico		 Friday Summary Presentation
Saturday Synthesis Report

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D) Internationalization
Rossini, Wilbanks, Goulding		 Friday Summary Presentation
Saturday Synthesis Report

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E) Citation of Models
Liz Lyon		 Friday Summary Presentation
Saturday Synthesis Report

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F) Public Engagement
C. Geoghegan, R. Tufel		 Saturday Synthesis Report
Saturday Synthesis Reports All Workstreams

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Plenary Vignettes

Presentation
Andrea Califano,
Columbia University		 Reconstruction and interrogation of a high-grade regulatory network reveals synergistic master regulators of disease subtypes
Lee Hood,
Institute for Systems Biology		 Network Analysis for Prion Disease in Mice: Implications for Mechanism, Diagnosis and Therapy

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Trey Ideker,
UCSD		 Biomarkers as networks, not individual loci
Hiroaki Kitano,
Systems Biology Institute		 SBI software platform for systems biology

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Sam Aparicio,
University of British Columbia		 MolEcular Taxonomy of BReast cancer International Consortium (METABRIC)

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Robert Epstein,
Medco		 How a Healthcare Company Can Accelerate Translation of Scientific Knowledge to Practice

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Brian Yandell,
University of Wisconsin		 Computational Infrastructure Platform for Systems Genetics Analysis
Jill Mesirov,
Broad Institute		 Integrative, Bayesian Patient Stratification for Medulloblastoma
Eric Schadt,
Sage/Pacific Biosciences		 Schadt Theory of Networks and Disease in 10 Minutes or Less
Vamsi Mootha,
Harvard		 Targeting the mitochondrial basis of human disease
Atul Butte,
Stanford		 Translating publicly-available molecular data into diagnostics, therapeutics, and novel insights into disease
Daphne Koller,
Stanford University		 Gene Networks: Bridging Genetics and Phenotype
Geoff Ginsburg,
Duke University		 Host Molecular Profiles for Detection and Diagnosis of Infectious Disease

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Ken Buetow,
NIH		 caBIG: Building a cancer e-ecosystem
Garry Nolan,
Stanford		 Mechanism, Therapy & Insights from the Single Cell
Laura Esserman,
UCSF

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Yoshihiden Hayashizaki,
Riken		 Promoter Profiling Driven Analysis of Transcriptional Regulatory Network

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Sharon Terry,
Genetic Alliance		 Openness as Process and Product

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John Wilbanks, Eric Schadt &
Stephen Friend		 Conference Summary

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